Server data from the Official MCP Registry
Turn any LLM into your lab assistant: search samples, track experiments, analyze data with AI.
Turn any LLM into your lab assistant: search samples, track experiments, analyze data with AI.
Remote endpoints: streamable-http: https://mcp.scispot.io/
Valid MCP server (1 strong, 1 medium validity signals). No known CVEs in dependencies. Imported from the Official MCP Registry.
Endpoint verified · Requires authentication · 1 issue found
Security scores are indicators to help you make informed decisions, not guarantees. Always review permissions before connecting any MCP server.
This plugin requests these system permissions. Most are normal for its category.
Remote Plugin
No local installation needed. Your AI client connects to the remote endpoint directly.
Add this to your MCP configuration to connect:
{
"mcpServers": {
"io-scispot-mcp": {
"url": "https://mcp.scispot.io/"
}
}
}From the project's GitHub README.
Connect Claude to your Scispot lab workspace — query Labsheets, manage ELN experiments, protocols, documentation, storage locations, manifests, and more, all through natural language.
The Scispot MCP Server is a remote Model Context Protocol (MCP) server that integrates Scispot's Lab Operating System with AI assistants like Claude. It provides 27 tools spanning Labsheet data management, Electronic Lab Notebook (ELN) operations, inventory/storage lookups, and Labflow sample tracking. The server runs as an AWS Lambda function and authenticates via OAuth 2.0 with PKCE.
Use these steps when using Claude in the browser (claude.ai), not Claude Code.
From a terminal, register the remote MCP server with Claude Code using your Scispot API key:
claude mcp add scispot https://mcp.scispot.io/ --transport http --header "Authorization: Bearer YOUR_SCISPOT_API_KEY"
Replace YOUR_SCISPOT_API_KEY with your actual API key. Restart Claude Code or reload MCP configuration if prompted so the new server is picked up.
This server requires OAuth 2.0 authentication with PKCE (S256). During the connection flow:
You need a valid Scispot account with API access. Contact your Scispot administrator if you need an API key.
User prompt: "Show me all the Labsheets in my workspace, then find the schema for the 'Cell Lines' Labsheet and search for rows where the Status column equals 'Active'."
What happens:
list_labsheets to return all available Labsheetsget_labsheet_schema for "Cell Lines" to discover column names and typessearch_labsheet_rows with a mandatory filter on the Status columnUser prompt: "Create a new experiment called 'Western Blot Optimization Round 3' in the 'Protein Lab' Labspace, then write a summary of the protocol steps I'll be using."
What happens:
list_labspaces to confirm "Protein Lab" exists and get its locationcreate_experiment_stub with the name and locationwrite_to_experiment to append the protocol summary as HTML contentUser prompt: "Find all samples in the 'Reagent Inventory' Labsheet where the Lot Number is 'LOT-2025-001', link them to the 'Sample Preparation v2' protocol in the 'QC Lab' Labspace, and add a structured section to the protocol documenting the linked samples."
What happens:
search_labsheet_rows to find matching rows in "Reagent Inventory"link_labsheet_to_protocol to create traceability links between the rows and the protocolwrite_to_protocol with content_type='json' and a structured elements array containing a section header and text descriptionsUser prompt: "Show me all storage locations in my workspace, then look up the manifest with barcode 'PLT-00142'."
What happens:
list_locations to return all root-level storage locations (freezers, rooms, cabinets)get_manifest with the barcode to fetch the plate/container details including all wells or slotsUser prompt: "List all Labspaces, then show me the protocols in the 'Genomics' Labspace, and read the full content of the 'DNA Extraction SOP' protocol."
What happens:
list_labspaces to discover available Labspaceslist_protocols with location "Genomics" to list all protocolsget_protocol by name to fetch the full protocol content| Tool | Description |
|---|---|
list_labsheets | List all Labsheets in the workspace |
get_labsheet_schema | Get column definitions for a Labsheet |
search_labsheet_rows | Search and filter Labsheet rows |
get_labsheet_row | Fetch a single row by UUID |
list_labsheet_folders | List folders or Labsheets within a folder |
list_labspaces | List all ELN Labspaces |
list_experiments | List experiments in a location |
get_experiment | Fetch full experiment content |
list_protocols | List protocols in a location |
get_protocol | Fetch full protocol content |
list_documentations | List documentation entries in a location |
get_documentation | Fetch full documentation content |
list_locations | List root-level storage locations |
get_manifest | Fetch a manifest by hrid, uuid, or barcode |
list_labflow_samples | List sample UUIDs for a Labflow |
get_image_thumbnail | Download a row's image thumbnail |
| Tool | Destructive | Description |
|---|---|---|
add_labsheet_rows | No | Add new rows to a Labsheet |
update_labsheet_rows | Yes | Overwrite existing row values |
create_experiment_stub | No | Create an empty experiment |
write_to_experiment | Yes | Append/prepend content to an experiment |
create_protocol_stub | No | Create an empty protocol |
write_to_protocol | Yes | Write text, structured JSON, or images to a protocol |
create_documentation_stub | No | Create an empty documentation entry |
write_to_documentation | Yes | Append/prepend content to documentation |
link_labsheet_to_experiment | No | Link Labsheet rows to an experiment |
link_labsheet_to_protocol | No | Link Labsheet rows to a protocol |
link_labsheet_to_documentation | No | Link Labsheet rows to documentation |
This MCP server processes only the data necessary to execute requested operations against your Scispot workspace. No conversation data is collected or stored.
For complete privacy information, see our privacy policy: https://www.scispot.com/legal/privacy-policy
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